Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., two-component system sensor histidine kinase DcuS from Klebsiella michiganensis M5al

 Score =  216 bits (551), Expect = 1e-60
 Identities = 168/527 (31%), Positives = 268/527 (50%), Gaps = 22/527 (4%)

Query: 13  LIIMTLSGLIELLLLVAAGFMYVKHSQEQEVGQKALGVAAFLAQTPAVINMIKTGRASDD 72
           L+I ++ G + L+L+ A  FM +  +    V   AL VA  LA  P V   +     S  
Sbjct: 26  LMIGSVIGSV-LILVYALWFMQISGATRDGVKDTALAVARTLADAPEVKRGLTLPPESGI 84

Query: 73  QQQSYRELTQLIGAAFIVIGDNQGIRLVHPIDERIGKPMVGGDNERALVEGEAYVSFAQG 132
            Q     + +  G  F V+ +  GIR  HP  + IGKP +G D  R  + G+  V+   G
Sbjct: 85  IQPLALAVARRNGLLFAVVTNMDGIRYSHPNSQIIGKPFIGEDI-RPTLAGKENVAVNHG 143

Query: 133 SLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATALLVVGANALVSSY 192
            L  ++R    V D   + IGVV++G  + ++  ++    + +I T L      A+ +  
Sbjct: 144 VLAPALRVFTPVFDDSRRQIGVVAIGISLSKVDTQIAASRWDVILTVLFSAVVCAVGTWS 203

Query: 193 ASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSINKSACEILGLRRE 252
             R  +R +LG EP+EI+  + +    + +LKEG++++D  G +  IN +A +IL    +
Sbjct: 204 LVRGLKRVLLGLEPQEISTQFQQRQAMLHSLKEGVVAVDADGQVTLINPAARDILFSGPD 263

Query: 253 QALNRRLTTILPESDLYTVLATGRTDHDIELYLNKHWIIANRSPIVVEGKVVGAVSSFRL 312
             + +  T +L  +DL  VL TG   +D EL  N   +I+N  P+  E  VVGA+S+FR 
Sbjct: 264 SDIAQ--TPLL--ADLQEVLQTGEPIYDRELGCNGLLLISNTVPVRDEDDVVGAISTFRD 319

Query: 313 RDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETEHYQV 372
           + E+++L ++L     Y + LR+ +HE  NKL+ I GLL M   D +++ + Q    YQ 
Sbjct: 320 KTEVSQLLQRLDGMVNYVDALRTTSHEFMNKLHVILGLLNMKSYDKLEEYVLQTAHTYQA 379

Query: 373 LIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETLPIHIKAEDVVTILGNLI 432
            I  ++  IK P++AG L+GK +RA+E G  L + + + +   P   +   +VT+LGNLI
Sbjct: 380 DIGEIQHRIKSPVVAGFLIGKIQRAKERGFTLTLAEESLVPDCPNEKQITVLVTVLGNLI 439

Query: 433 DNAFEATLTAIRTLSPVPPERRVIEVSIS-DFGNEIIL-EVDDQGCGLPKELEHWQLTEK 490
           +NA +A                  EVS+   + N  +  EV D G G+P+      +  K
Sbjct: 440 ENALDAMSGQAEG-----------EVSLLLHYQNGWLSGEVSDDGPGIPEAFID-DIFNK 487

Query: 491 GVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK-AQGTRMTVYLPKD 536
           G S+K  +NRGVGLFL  Q      G L + S+    T+  V+LP D
Sbjct: 488 GFSTKG-ENRGVGLFLASQQLRELGGSLAVESEPGVFTQFFVHLPWD 533