Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 44/289 (15%)

Query: 278 DHDIELYLNKHWIIANRSPIVVEGKVVGAVSSFRLRDEINELTEQLAQTREYAE------ 331
           ++ +E+  +KH+  A  +P   EG  V A+    + D I   +E+L + +  AE      
Sbjct: 227 EYPLEVDGSKHYFQARIAPF--EGNTVLALIH-DIGDRIRR-SEELIEAKRRAEDADRMK 282

Query: 332 --MLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETEHYQVLIEFLRETIKDPL-IAG 388
              L + +HE R  LN I G  ++  L   ++   +  E  Q     L + I D L ++ 
Sbjct: 283 SVFLANMSHEIRTPLNAIVGFSEIMALTENEEEKHEYLEIIQKNSNLLLQLINDILDLSR 342

Query: 389 MLLGKTE-RARELGLELMVEDGARLETLPIHIKAE-----------------DVVTILGN 430
           +  GK+E   +++ +  +V++  ++  L + +  +                  V+ +L N
Sbjct: 343 IESGKSEMHFQQVEIAGLVDEVEKVHQLKMKLNVDLKVVRPQGEFWTSTDRNRVMQVLFN 402

Query: 431 LIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGLPKELEHWQLTEK 490
            + NA + T T   TL             +   G+ + L V D GCG+P+E      T  
Sbjct: 403 FLSNAIKNTETGSITLG------------LKQEGDWLKLFVSDTGCGIPEEKLPQIFTRF 450

Query: 491 GVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK-AQGTRMTVYLPKDEL 538
              +  VQ  G+GL + K + +R  G++++ S+  QG+   +YLP  E+
Sbjct: 451 EKLNDFVQGTGLGLSICKSIVERLGGRIEVSSELGQGSTFALYLPYQEI 499