Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 49/288 (17%)

Query: 251 REQALNRRLTTILPESDLYTVLAT--GRTDHDIELYLNKHWIIANRSPIVVEGKVVGAVS 308
           R  +LNRRL T     +L  ++ T     D     +  +   +++ S      ++   ++
Sbjct: 196 RANSLNRRLKTTGNNDELEDMIETLNSMLDRLDSAFKAEKSFVSHASH-----ELNNPIT 250

Query: 309 SFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETE 368
           + +   EI+ L E+   T EY E L+  + E +   N I  LL +   D           
Sbjct: 251 AIQGECEISLLKER--STGEYIEALQRISSESKRISNLIRHLLFLSRQD----------- 297

Query: 369 HYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETLPIHIKAEDVVT-- 426
             + LI+   E +  P +   L+   ER R     L  ++  +  T    +KA   +   
Sbjct: 298 --EELIKSNMEAMSLPDMLNDLIKMNERIR-----LHYQETGKAAT----VKANPYLLKI 346

Query: 427 ILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGL-PKELEH- 484
            L N+IDNA + +              + +++++S     ++LE+ DQG G+ P+E+EH 
Sbjct: 347 ALKNIIDNACKYS-------------EKEVDITLSQKDQHLVLEIKDQGIGIPPEEIEHI 393

Query: 485 WQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSKAQ-GTRMTV 531
           +Q   +G ++     +G+GL L +++   Y  +L++ S+ + GT++ V
Sbjct: 394 FQSFYRGSNTHDYAGQGIGLSLTQKIVSAYNARLEISSEIEKGTKVRV 441