Pairwise Alignments

Query, 228 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 70.1 bits (170), Expect = 7e-17
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 3/129 (2%)

Query: 1   MKTRLLIIEDDAAIAQLHHRYLSQLEGFEVVGIAMSQADARLQMEVLNPDLVLLDVYLPD 60
           M    L++ED  ++  L+  YL + E   V  +    ADA  ++    PDL++LD+ LPD
Sbjct: 1   MNYSALLVEDSMSLGALYTEYL-RAEDINVTHVHYG-ADALKELSNWQPDLLILDIKLPD 58

Query: 61  GTGLELLQWIRGRNVHCDVILITAAREVETLQQAMRGGVVDYLLKPVMFPRLETALRKYQ 120
            +GL++L+ ++  + H   I+ITA   ++    AMR G  D+L+KP    RL   +R   
Sbjct: 59  MSGLDILKQVQQSHPHISTIMITAHGSIDIAIDAMRSGAFDFLVKPFDAKRLSITVRN-A 117

Query: 121 MRQAELKQL 129
           ++Q +L +L
Sbjct: 118 LKQKQLLEL 126