Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 42.4 bits (98), Expect = 9e-09
 Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 19/222 (8%)

Query: 29  ESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALL 88
           E     TE + P N+ +E+ +  G+  +++    A + +T N  ++ +QP  R+ +    
Sbjct: 23  EEYQVITEEWAPYNY-QENNQLTGMTTEIV---RAIMALTGNDFEVLLQPSMRATQVLKT 78

Query: 89  KQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIE-----LGNYRIGV 143
           +   +++S  RT  RE L+ WVGPI +  +        Q+    P+      L   +I  
Sbjct: 79  RPKTIMYSLFRTPEREPLYKWVGPIVEESI-----HPYQLASTPPVNSLEQLLHAPQITT 133

Query: 144 IRDDIGEQQLLQLGVPRESMVEGSTVSSLA-EQLLKKRIDLLAYDERTALWWMSQ--DSY 200
               +  Q L  LG    ++ + +T S L    LL  R  ++  D    + + S+  +  
Sbjct: 134 RHAGLVPQMLQSLGF--NNLDKSATESKLLYRMLLAGRTGIIIGDTDAGVAYYSRQLNIA 191

Query: 201 PVEEFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIELIKNS 242
           P         L + SLY AF+ + +  V+      +E ++ S
Sbjct: 192 PGTLRRIPIELYRSSLYIAFSPDSEDEVVAAWASALEKLRRS 233