Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., ABC-type amino acid transport, signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N2E2

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 15/245 (6%)

Query: 1   MQWRFCLTTVLGVVLSFSPSVKVQAQGLESLTYYTENYPPLNFAKEDGKPAGIAVDLLLE 60
           M +R  L + L   L  S S++  A+ +E +T  +     L   + D K  G  + +  E
Sbjct: 1   MHYRLMLCSCL---LLTSISLQSHAEAIEVVTEDS-----LYAYQRDDKVVGPGIRIAEE 52

Query: 61  AAAAVNVTLNLDQIFVQPWPRSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADI-KVV 119
                N       + + PW R+Y  AL + + ++F   RT  RE LF WVG I  +   +
Sbjct: 53  TLK--NAQFTDYSLSLYPWARAYEKALHEPNVLIFPLDRTPAREQLFKWVGEIHRVASRL 110

Query: 120 VLARKSSQIKVNDPIELGNYRIGVIRDDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLKK 179
              R S  I +N+  +   Y IGV+R+D  +  L Q G  R  +V  +      ++LL  
Sbjct: 111 YKMRDSKGIAINNLEDAKQYSIGVVRNDAKQIYLQQRGFTR--LVISANNHDNFQKLLNH 168

Query: 180 RIDLLAYDERTALWWMSQDSYPVEEFETVYVL--MQGSLYYAFNKNIDKSVLNDLQKGIE 237
           +I LL   E TA              E VY L      ++ AF+ +    V+   Q+  E
Sbjct: 169 QIQLLPMPENTARLMSKDAQVDFTSLEEVYTLDEQPHRVHLAFSLSTPDEVVARAQRAFE 228

Query: 238 LIKNS 242
            +K S
Sbjct: 229 QLKAS 233