Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E2

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 21/256 (8%)

Query: 10  VLGVVLSFSPSVKVQAQGLESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTL 69
           V GV++  + SV      L  +T   E  PP N   ++G+  G++     E   AV   +
Sbjct: 10  VWGVLMFLAASVCAAEAPLRIVT---EELPPYNMT-QNGRMTGMST----EVVQAVLKEV 61

Query: 70  NLDQ-IFVQPWPRSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQI 128
            +D  I   PW R+Y  AL + + +++S  RT  RE LF WVG I   +  + +     +
Sbjct: 62  GMDAPIHSMPWARAYELALNESNVLIYSIVRTPAREPLFQWVGSIGPTQWYIYSLADRPV 121

Query: 129 KVNDPIELGNYRIGVIRDDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLK-KRIDLLAYD 187
           K++   +   ++I  +  D+GEQ L+  G      ++ ST      + LK   ++L   +
Sbjct: 122 KLDSLADAHGHQIATVNQDVGEQYLVSKGFRIGEELQSSTKYEHNYRKLKVDHVELWISN 181

Query: 188 ERTALWWMSQ-----DSYPVEEFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIELIKNS 242
           E  AL+   Q     D   +       +     L  AF++N     +   + G+E I+  
Sbjct: 182 ELNALYLTRQNGEDPDKLLIRSLALPELSSADGLSMAFSRNTPADTVAKFRAGLETIR-- 239

Query: 243 VNENGVTRYQAILDKY 258
              NGV  Y AIL K+
Sbjct: 240 --RNGV--YDAILRKW 251