Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 19/235 (8%)

Query: 30  SLTYYTENYPPLNFAK------EDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSY 83
           SL   TEN+PP N AK      +D    GIAVD++ E     +++ +L   F  PW R Y
Sbjct: 26  SLVLLTENFPPYNMAKNGKNFAQDENIHGIAVDIVREIFKRADISYSLTLRF--PWERIY 83

Query: 84  RSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRIGV 143
           + AL      +F   R   RE LF WVGPI     ++LA+  S+I ++   +   Y+IG 
Sbjct: 84  KLALENPGYGVFVMARLPEREKLFKWVGPIGPDDWIMLAKADSKIALDSLEQARQYKIGA 143

Query: 144 IRDDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVE 203
            + D   + L + G+    ++        A +L+  +IDL A  +    +   Q+   V 
Sbjct: 144 YKGDAIAETLAKQGLKPIVVLRD---QDNARKLVNGQIDLWATGDPAGRYLARQEG--VT 198

Query: 204 EFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIELIKNSVNENGVTRYQAILDKY 258
           + +TV       LY A NK++   V+  LQ  ++ ++    E GV    AI+ +Y
Sbjct: 199 DLKTVLRFNSAELYLALNKDVPDDVVARLQAALDELR---KEGGV---DAIMARY 247