Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 29/213 (13%)

Query: 39  PPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALLKQDGVLFSTT 98
           PPL F  +D K  GI  D +L A A      ++  +   PW R+ +    KQD ++   +
Sbjct: 45  PPLTFV-DDPKGHGIVGDAVLMAIANAGYAADVQAL---PWARAQKHVSEKQDILIAPLS 100

Query: 99  RTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIE-----LGNYR-IGVIRDDIGEQQ 152
           RT  RE  F+W+ PI       ++ + +   ++ P+         YR IGV      E+ 
Sbjct: 101 RTPEREEHFSWIAPI-------MSMERAFFSLDRPVSSFAEARKTYRVIGVGLGSAQEEI 153

Query: 153 LLQLGVPRESMVEGSTVSSLAEQLLKKRID--LLAYDERTALWWMSQDSYPVEEFETVY- 209
           L   G     +   +   + A+ LL+ RID       E   +W       P     T+  
Sbjct: 154 LRAQGFDNRQIYPLTIGDNPAQMLLRGRIDAWFNGVPETQYIW-------PKVSRRTLLM 206

Query: 210 --VLMQGSLYYAFNKNIDKSVLNDLQKGIELIK 240
             V+ +  LY A +K      +  L+K IE ++
Sbjct: 207 SPVMNRTDLYLACSKQCSPQQVQSLRKAIETLR 239