Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 23/219 (10%)

Query: 31  LTYYTENYPPLN-------FAKED---GKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWP 80
           +T  T+++PP N       FA+ D   G  A    D+   A  A N+TL        PW 
Sbjct: 31  ITLQTDSFPPFNMGPNSKGFARGDDVQGIDADTVRDIFRRAGIAYNLTLR------GPWN 84

Query: 81  RSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYR 140
           R Y     +    LFS  RT      F WVGP+A    V+LA   S +K +   +   Y+
Sbjct: 85  RLYEQTQQQPAHGLFSVARTPQNAGQFKWVGPLAHHASVLLAPADSGLKFDSLAQAQGYQ 144

Query: 141 IGVIRDDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSY 200
           IG   +      L   G+   + +     +    +LL  RIDL A  +   +W       
Sbjct: 145 IGGHANGSVSLFLKSQGIRTSNSLND---AENLRKLLTGRIDLWAVAD--PVWRHYARLQ 199

Query: 201 PVEEFETVYVLMQGS--LYYAFNKNIDKSVLNDLQKGIE 237
            V+E +    L   S  LY A + +    V++ LQ+ ++
Sbjct: 200 GVDESQLRIALSYRSEPLYLALSPDTPDEVVSRLQQALD 238