Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., amino acid ABC transporter substrate-binding protein, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 17/242 (7%)

Query: 7   LTTVLGVVLSFSPSVKVQAQGLESLTYYTENYPPLNFAKEDGKPA-------GIAVDLLL 59
           L  ++G+ +  S  V+       S+   TEN+PP N A  DGK         GIA +++ 
Sbjct: 6   LLALIGIGVLSSEGVRASESTPYSMVLLTENFPPFNMAV-DGKNFAQENNIDGIAAEVVR 64

Query: 60  EAAAAVNVTLNLDQIFVQPWPRSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVV 119
           E     N+  ++   F  PW R Y+ AL K    +FSTTR   RE+LF WVGP+     V
Sbjct: 65  EMFKRANIGYSMTLRF--PWDRVYKLALEKPGYGVFSTTRLPERESLFKWVGPVGSYDWV 122

Query: 120 VLARKSSQIKVNDPIELGNYRIGVIRDDIGEQQLLQLGV-PRESMVEGSTVSSLAEQLLK 178
           +LAR  S I +    +  +YRIG  + D   ++L  +G+ P   + +   V  LA     
Sbjct: 123 MLARGDSPITLTSLEQARDYRIGAYKGDAIGERLKTMGLNPILMLRDRDNVKKLA----N 178

Query: 179 KRIDLLAYDERTALWWMSQDSYPVEEFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIEL 238
            +IDL A  +    +    +   V  F+T        LY A NK+    V+  LQK ++ 
Sbjct: 179 GQIDLWAVGDPVGRYLAKLEG--VTGFKTALRFNSAELYLAVNKSTPDEVVRRLQKALDQ 236

Query: 239 IK 240
           ++
Sbjct: 237 MR 238