Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)

Query: 31  LTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALLKQ 90
           L   TE  PPL++ + D K  G AV+L+ +  + V    +++   V PW R+Y  A    
Sbjct: 35  LRLLTEPLPPLSYLEGD-KATGYAVELVEQLKSRVGEDASIE---VLPWARAYSVASQLP 90

Query: 91  DGVLFSTTRTTHRENLFNWVGPIADIKVVV--LARKSSQIKVNDPI-ELGNYRIGVIRDD 147
           + +LFST     R + F++VGPIA  +++V  LA  +      D + +LG+  +GV R  
Sbjct: 91  NVLLFSTAVRDSRRSQFDFVGPIATARIMVYKLATDTEIPASLDAVSQLGS--LGVYRGS 148

Query: 148 IGEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVEEFET 207
             ++ L   GV +   V    + SL  QLL  R+      +      +SQ          
Sbjct: 149 PSQRILNTHGV-KNVEVSSYPLQSL-RQLLAGRVRYWCQADLAVSMLLSQAGTNELAISP 206

Query: 208 VYVLMQGSLYYAFNK 222
           ++ L +  LY AF++
Sbjct: 207 LFELERVELYLAFSR 221