Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  178 bits (451), Expect = 1e-49
 Identities = 93/231 (40%), Positives = 145/231 (62%), Gaps = 3/231 (1%)

Query: 28  LESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSAL 87
           L SL++ TE YPP NF + DGK  GIAVDLLL AAA    +++ + I V PW R+Y  AL
Sbjct: 27  LNSLSFLTEEYPPFNFTR-DGKVQGIAVDLLLSAAALEGQSISHESIRVYPWTRAYAMAL 85

Query: 88  LKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRIGVIRDD 147
              + VLFSTTRT  RE+LF+WVGPIA +++V++A +   I++N   +L + RIGV+ +D
Sbjct: 86  RGHNMVLFSTTRTAERESLFHWVGPIAPMRIVLIAPRQRHIRINSLADLKDKRIGVVTND 145

Query: 148 IGEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVEEFET 207
           IGE+ L QLG+  + +   ++   L + + + RIDL AY+E  A W + +     ++FE 
Sbjct: 146 IGEEVLAQLGL-ADQLQSNASADLLLKMMARGRIDLWAYEETVAKWLIKESGMSFDDFEV 204

Query: 208 VYVLMQGSLYYAFNKNIDKSVLNDLQKGIELIKNSVNENGVTRYQAILDKY 258
           VY+L    LYYAF++++ +++   LQ  ++ +K  +  +  + +  I  KY
Sbjct: 205 VYLLRDAELYYAFSRDVPEALRVQLQHALDTLKTPL-ADATSGWATITQKY 254