Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Pseudomonas fluorescens SBW25-INTG

 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 4/157 (2%)

Query: 37  NYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALLKQDGVLFS 96
           ++PP  +  EDG+  G+A D +      + V + +  I    W      A   Q  ++ S
Sbjct: 45  SWPPFEYRDEDGRYQGLAADYVRLIQDRLGVRIKV--IETPNWSAVLELARANQLDLVPS 102

Query: 97  TTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRIGVIRDDIGEQQLLQL 156
              T  R+N   +  P  D  +V+LA +   ++  +  +L   +I V+ ++    +LL+ 
Sbjct: 103 VMSTPERQNYLAFTRPYIDFPMVILAHEGG-VRPRNLKDLYGLKIAVV-ENYAPHELLRT 160

Query: 157 GVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALW 193
             P  ++V    VSS  + L    +D +  D  +++W
Sbjct: 161 HHPDLNLVAMPNVSSTLQALATGEVDAVVSDLASSVW 197