Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 73.6 bits (179), Expect = 4e-18
 Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 7/200 (3%)

Query: 27  GLESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSA 86
           G  SL   TE + P+++ +E G P G  V L+   A  +    N++   V PW R++  A
Sbjct: 11  GAASLRMLTEEWAPMSY-QEQGLPMGYGVSLVQRLAKELGEEANIE---VLPWARAFAIA 66

Query: 87  LLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNY-RIGVIR 145
             + + +LF+T+    R   F++VGPIA   + + A+   ++      EL     +GV R
Sbjct: 67  EGQANVLLFATSLNEQRSRDFDFVGPIATTSISIYAKADDRVNPASVAELDALGSVGVYR 126

Query: 146 DDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVEEF 205
             +GE  L + GV  E +   S     A QL   RI      +      +++ +  ++E 
Sbjct: 127 GSLGESILTRQGV--EHLTVASFPQQSARQLQHDRIRFWCQADLAVERLLAEVNMGLDEV 184

Query: 206 ETVYVLMQGSLYYAFNKNID 225
             V  L Q  LY AF+K  D
Sbjct: 185 HPVLELAQIDLYLAFSKGTD 204