Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 839 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 12/208 (5%)

Query: 36  ENYPPLNFAKEDGKPAGIAVDL--LLEAAAAVNVTLNLDQIFVQPWPRSYRSALLKQDGV 93
           +NYPP  F    G+P G  VDL  L E      V     Q+    W R+ R     +  V
Sbjct: 43  DNYPPYIFRDPSGQPVGYLVDLWSLWEQKTGRRV-----QLIATDWGRAQRLMAENEADV 97

Query: 94  LFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRIGVIRDDIGEQQL 153
           +     T  R+ L+ +  P A++ V + +  SS   +++   L  + IGV   D   ++L
Sbjct: 98  IDMIFHTAARDALYEFSQPYANLPVGIYSH-SSISGISNTDNLKGFLIGVQVGDACIEEL 156

Query: 154 LQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVEEFETVYVLMQ 213
              GV   ++ +    + +    + + I L   D+  A +++ +      +F   + L Q
Sbjct: 157 QGKGV--TNLRQFKNYAEMIAAAMAEEIKLFCLDQLPANYYLYRLDLQ-RQFRKSFDLYQ 213

Query: 214 GSLYYAFNKNIDKSVLNDLQKGIELIKN 241
           G  + A  K  D + L  +++G+ LI N
Sbjct: 214 GRFHRATRKG-DTATLAAVERGMALISN 240