Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 9/210 (4%)

Query: 35  TENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQ-IFVQPWPRSYRSALLKQDGV 93
           TE +PP++F ++DG P G  V+L+      + V+L   Q I V PW R+Y  A    + +
Sbjct: 35  TEAWPPMSF-EQDGVPTGFGVELV----NMLQVSLGQQQSIEVLPWARAYSIASTTPNVL 89

Query: 94  LFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRI-GVIRDDIGEQQ 152
           LF+T+ +  RE  F+++GPIA  K+ + A+    I +N   ++    I GV R+ +G Q 
Sbjct: 90  LFATSISDERETHFDFIGPIATSKITLYAKADDSININQLSDVNAAGIVGVYRESVGAQL 149

Query: 153 LLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVEEFETVYVLM 212
           L Q GV   +++  S     A+QLL  R+ L    +      + +        + VY L 
Sbjct: 150 LQQQGV--NALLVASFPQQSAKQLLFSRVRLWCQADLAVKHILEEVGAKESAIKPVYTLA 207

Query: 213 QGSLYYAFNKNIDKSVLNDLQKGIELIKNS 242
           +  LY AF+K      +   Q  +E  K S
Sbjct: 208 EIRLYLAFSKGTPAETVQRWQTELEKRKES 237