Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 49.3 bits (116), Expect = 8e-11
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 1   MQWRFCLTTVLGVVLSFSPSVKVQAQGLESLTYYT---ENYPPLNFAKEDGKPAGIAVDL 57
           M+  F  T V+ +VL+F+          E  TY      NYPP  +  +DGKPAG  VD 
Sbjct: 1   MKRSFVYTVVMALVLAFA-----SVAAAEEKTYINGIDANYPPFAYVDKDGKPAGFDVDS 55

Query: 58  LLEAAAAVNVTLNLDQIFVQP--WPRSYRSALLKQ-DGVLFSTTRTTHRENLFNWVGPIA 114
           +   AA +       ++  +P  W     S L K+ D V    + T  R+    +  P  
Sbjct: 56  MNWIAAKMGF-----KVVHKPMDWDGIVPSLLAKKIDMVCSGMSITDARKKQITFSEPYW 110

Query: 115 DIKVVVLARKSSQIKVNDPIELGNYRIGVIRDDIGEQQLLQLGVPRE 161
            +  V +A+K S++ V+D +  G  ++GV R    E   LQ   P +
Sbjct: 111 TVSQVFVAKKDSKLSVDD-VYKGKKKLGVQR-GTSEADALQKQAPEK 155