Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 937 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 24  QAQGLESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFV-QPWPRS 82
           Q Q    +    E+  P  F   DG+  G+ VDL  E     N  L    +FV + W  S
Sbjct: 24  QGQTESLIVVMGEDSFPYQFVDNDGEATGLLVDLWKEWGKRTNTPL----VFVARHWNES 79

Query: 83  YRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRIG 142
            +     +  V     +T  RE LF++  PIAD+   +   KS Q K +   EL  Y+IG
Sbjct: 80  LQQLQQGKAQVHIGMGQTPEREQLFDFAEPIADVSTYLYLHKSLQGKKSIK-ELIPYQIG 138

Query: 143 VIRDDIGEQQLLQL 156
           ++     E +L ++
Sbjct: 139 IVSGSSHEAELRRI 152



 Score = 31.6 bits (70), Expect = 6e-05
 Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 12  GVVLSFSPSVKVQAQGLESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNL 71
           GV LS S    +   G E    Y + +PP+ F+ E G+ AGI  D  +    A  + +N+
Sbjct: 485 GVQLSSSEQDYLSQLG-ELKLGYLKQWPPMEFSDEQGQFAGINSD--VSQLLAEQLRINI 541

Query: 72  DQIFVQPWPRSYRSALLKQDGVLFSTTRTTHRENLFN-----WVGPIADIKVVVLARKSS 126
             +    W     +    +  +  S  +T  R+         W  P        L  +  
Sbjct: 542 QPVAFDDWHSLIGALRSGEIALAGSIAQTAERQQFLTFSEPYWPSPWG------LVSQLE 595

Query: 127 QIKVNDPIELGNYRIGVIRDDIGEQQLLQLGVPRESMVEGSTVSSLA 173
           Q+ V +  +L   R+ V+       QL+ L    + ++   T S L+
Sbjct: 596 QVSVFNLAQLAGQRVAVVEGYHLVAQLMALQPSLKLVLVPDTQSGLS 642