Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  103 bits (258), Expect = 3e-27
 Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 7/212 (3%)

Query: 30  SLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALLK 89
           +L  YTE + P++F+  DGKP G+AV ++ E    VN   N D I V PW R ++    +
Sbjct: 23  TLNIYTEEWAPISFSV-DGKPDGLAVQVVQEIQKRVN---NQDPIKVVPWARGWKIMTEQ 78

Query: 90  QDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYR-IGVIRDDI 148
            + VLF+ TRT  RE LF+ +GP+A       A K+SQ+ ++   +    + +GV R  +
Sbjct: 79  ANTVLFTMTRTPEREQLFSMIGPVAVGTTNFYALKNSQLNISSIDDAKQAKAVGVYRSSV 138

Query: 149 GEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVEEFETV 208
            EQ L++ G+   ++   ST    A+QL+K+RIDL      TA   +++    +++ +++
Sbjct: 139 EEQLLMEHGL--TNLAPSSTPLLSAKQLMKRRIDLWCNANLTAPSILAEAGASIDDVKSL 196

Query: 209 YVLMQGSLYYAFNKNIDKSVLNDLQKGIELIK 240
           Y +    LY AF+K      ++  ++ +  IK
Sbjct: 197 YTISANHLYIAFSKGTPSEEIDKWKEALISIK 228