Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 8/242 (3%)

Query: 3   WRFCLTTVLGVV-LSFSPSVKVQAQGLESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEA 61
           +R  L   LG   +S + +        +++   TE +PP++F ++DG P G  V+L+ + 
Sbjct: 12  YRLLLCVSLGYAGISLAATDVATEAATKTVRLVTEAWPPMSF-EQDGVPTGFGVELVNQL 70

Query: 62  AAAVNVTLNLDQIFVQPWPRSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVL 121
              V      ++I V PW R+Y  A    + +LF+T+ +  RE+ F+++GPIA  K+ + 
Sbjct: 71  QTRVG---QQEKIEVLPWARAYSIAHSSPNVLLFATSISDERESHFDFIGPIATSKITLY 127

Query: 122 ARKSSQIKVNDPIELGNYRI-GVIRDDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLKKR 180
           AR    I +N   E+ N  I GV R+ +G Q L Q G+  + ++  S     A+QLL  R
Sbjct: 128 ARADDPISINQLSEVNNAGIVGVYRESVGAQLLQQQGI--DGLLVASFPQQSAKQLLFSR 185

Query: 181 IDLLAYDERTALWWMSQDSYPVEEFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIELIK 240
           +      +      +        + + VYVL +  LY AF+K      +   Q  +E +K
Sbjct: 186 VRFWCQADLAVKHILQDIGAKEPDIKPVYVLSEIHLYLAFSKGTSSDTVQRWQAELEKLK 245

Query: 241 NS 242
            S
Sbjct: 246 ES 247