Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Chemotaxis protein CheV (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

 Score =  113 bits (283), Expect = 5e-30
 Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 35/285 (12%)

Query: 43  INVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPLVDLAGWLGVPTSTDISKKYVIV 102
           IN+ KV E+I  P  T  P + PH+ G+ + R     ++DL+  +G     D +   +IV
Sbjct: 26  INLLKVSEIIPCPPLTKLPESHPHVKGIATLRGASLSVIDLSRAIGERPLEDPNGGCLIV 85

Query: 103 TDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFEKI 162
           TD +R   G  + ++S+I      D+  P  F   G +  +  V   D  L+ +LD EK+
Sbjct: 86  TDVSRSKQGLHVQAVSKIVHCLTTDIR-PPPFGSGGVRSYITGVTSVDGTLVQVLDIEKV 144

Query: 163 ISDINP--------ELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDT 214
           I  I P        ELSME  +V  + +               I+VVDDS         T
Sbjct: 145 IHGIAPAQIETAPTELSMEDAEVLGNAR---------------ILVVDDSQVALQQSVHT 189

Query: 215 LSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRL 274
           L + G      +   EA + L++L+  A++        I+ +V+D+EM  MDG  L + L
Sbjct: 190 LRNLGLQCHTARSAKEAIDCLLDLQGTAQQ--------INLIVSDIEMSEMDGYALTRTL 241

Query: 275 RDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTK---PEIGK 316
           R+   +S + +++ +SL S  N  KA   GAN  LTK   PE+ K
Sbjct: 242 RETPDFSHLYVLLHTSLDSAMNSEKARLAGANAVLTKFSSPELTK 286