Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 1967 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

 Score = 76.6 bits (187), Expect = 5e-18
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 22/168 (13%)

Query: 145  AVVRQDKKLIMILDFEKIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDS 204
            A +  D ++++ILD    I  +  ++   K  VT D + +  + ++       ++VVDDS
Sbjct: 1804 ATILGDGRVVLILDLLAPIRAMQAQVP--KRPVTQDVEPEPQRPLL-------VLVVDDS 1854

Query: 205  AFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVVTDVEMPR 264
              +R +    L   G N++  KDG +A   L        EE++P     D ++ D+EMPR
Sbjct: 1855 VTVRKVTSRLLERHGMNVLIAKDGVDAMLLL--------EEHMP-----DLMLLDIEMPR 1901

Query: 265  MDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKP 312
            MDG  +  ++R D+    +PI+M +S     +R +A+A+G ND L KP
Sbjct: 1902 MDGFEVATQVRADERLRHLPIIMITSRTGQKHRDRAMAIGVNDYLGKP 1949