Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., CheW protein from Pseudomonas syringae pv. syringae B728a

 Score =  134 bits (338), Expect = 2e-36
 Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 21/311 (6%)

Query: 16  GTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSRE 75
           G N LEI+ F L      GR     + INV KV+EV+++P+ T  P     + GV + R 
Sbjct: 16  GENRLEILMFRLA-----GRQ---LFAINVFKVQEVLQLPKLTLMPQRHSFVCGVVNLRG 67

Query: 76  ILTPLVDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFL 135
              P++DL+  +G+          +IVT++NR    FL+  + RI  ++W+ +  P   +
Sbjct: 68  QTLPVIDLSQAIGMRPLVPGPGSTIIVTEYNRSVQAFLVGGVDRIVNMNWDAIMPPP--V 125

Query: 136 EAGEQDCVVAVVRQDKKLIMILDFEKIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNA 195
            AG Q  + A+ + D +L+ I+D EK++++I P      Y+  V R+  L   ++     
Sbjct: 126 SAGRQHYLTAISKVDDQLVEIIDVEKVLAEIVP------YNAKVSRE-KLEDPVLENARG 178

Query: 196 KTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDA 255
           + +++VDDS    + ++DTLS  G  +    DG     K + + +A  +    V E +  
Sbjct: 179 REVLLVDDSKVALAQLRDTLSQLGLKLHVASDG----LKALNMLKAWADAGENVHEKLLM 234

Query: 256 VVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIG 315
           V TD EMP MDG  L   +R+D     + IV+ +SL    N +    +G ++ L+K +  
Sbjct: 235 VFTDAEMPEMDGYRLTTEIRNDARLRGLYIVLHTSLSGSFNESMVKKVGCDNFLSKFQPD 294

Query: 316 KMVAMMDKYIL 326
           K+V ++ + +L
Sbjct: 295 KLVEVVRERLL 305