Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 16/115 (13%)

Query: 198 IMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVV 257
           I+VVDD A +R ++   LS AGY ++   DG   HE L   +Q A           D +V
Sbjct: 16  ILVVDDEAAVRRILTMRLSMAGYQVVVASDG---HEALAMFEQEAP----------DLIV 62

Query: 258 TDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKP 312
            DV +P++DG  + + LR     S +PI+M S+L    +R   L LGA+D L KP
Sbjct: 63  LDVMLPKLDGYGVCRELR---KLSDVPIIMLSALGDIADRITGLDLGADDYLPKP 114