Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 952 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 46/260 (17%)

Query: 70  VFSSREILTPLVDLAGWL------------GVPTSTDISKKYVIVTDFNRMTNGFLIDSI 117
           V +  EIL PL+ L  W             GVPT   I++  V++ +      G  +D  
Sbjct: 703 VLNLDEILVPLLQLDQWFQFSRPCPPISLDGVPT---INQPTVLLVNQGNSFVGIQVDRY 759

Query: 118 SRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFEKII-----SDINPELSM 172
                ++   V S    L  G   C +     D +++ ++D   ++     S++   LS+
Sbjct: 760 WGEQEVTIRQVNSTIP-LPPGFSSCTIL---GDGRIVPLVDTFSLLQWIQNSNVPSRLSL 815

Query: 173 EKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAH 232
           +           +        + K+I+++DDS  +R  + + L  AGY +   KDG EA 
Sbjct: 816 KA----------IQPATYQLPSQKSILIIDDSINVRRFLANILEKAGYRVEQAKDGQEAI 865

Query: 233 EKLMELKQAAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLM 292
           +KL   K   K         ++A + DVEMPR+DG   + ++++  + +++PI M +S  
Sbjct: 866 DKL---KDGLK---------VEAAICDVEMPRLDGYGFLTQVKNIVAGANLPIAMLTSRS 913

Query: 293 SDDNRAKALALGANDTLTKP 312
            D +R  AL LGA    TKP
Sbjct: 914 GDKHRRLALNLGAAAYFTKP 933