Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (327), Expect = 4e-35
 Identities = 85/286 (29%), Positives = 149/286 (52%), Gaps = 19/286 (6%)

Query: 38  TCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPLVDLAGWLGVP--TSTDI 95
           T  + +   K+RE++   + +  P + P ++G  + R    P++D+A  +G    T  + 
Sbjct: 36  TQLFALGTLKIRELVPFSKLSAIPQSHPAILGAATVRGHTIPIIDMAAAVGYAPITPEEC 95

Query: 96  SKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIM 155
           +  Y+I+TD  RM  GFL+ SI +I   +W D+ESP   L  G+   +  V R D KL+ 
Sbjct: 96  ANAYIIITDCQRMVMGFLVRSIDKIIECNWRDIESPPDNL--GKNAFLTGVTRVDDKLVQ 153

Query: 156 ILDFEKIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTL 215
           +LD E ++S I P       D T     D+ + ++   N   I++VDDS   R  + D L
Sbjct: 154 LLDVELLLSKIFPASP----DTTRAILTDVQREILKPLN---ILLVDDSMVARKQLSDAL 206

Query: 216 SSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLR 275
            S     +   DG +A   L  +++AAKE        +D +V+D+EMP +DG  L   ++
Sbjct: 207 DSINIPYLVTSDGRDA---LSIMEEAAKE-----GRPVDLLVSDIEMPGLDGYELAFEVK 258

Query: 276 DDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIGKMVAMM 321
           +  + +   I++ +SL S+ + ++A  +GAN+ LTK +  +++  M
Sbjct: 259 NTPALADAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELIDAM 304