Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (383), Expect = 1e-41
 Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 21/310 (6%)

Query: 16  GTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSRE 75
           G N LE++ F L     +GR +   +GINV KV+EV++ P  T  P   P++ GV   R 
Sbjct: 16  GQNRLELLLFKL-----NGRQR---FGINVFKVKEVLQCPPLTGLPKLNPYVRGVAHIRG 67

Query: 76  ILTPLVDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFL 135
               ++DL+   G     D    ++I++++NR   GFL+ S+ RI  ++W  +  P Q  
Sbjct: 68  QTISVIDLSAATGGRPIEDTEGCFIIISEYNRSVQGFLVKSVERIINMNWEAIMPPPQ-- 125

Query: 136 EAGEQDCVVAVVRQDKKLIMILDFEKIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNA 195
            AG    + AV   + +L+ ILD EKI+ +I+P          + ++VD  Q  + +   
Sbjct: 126 GAGRYSYLTAVTEIEGELVEILDVEKILDEISP------VKTQISQEVD-EQLTIDRERH 178

Query: 196 KTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDA 255
             IMV+DDSA  R  I   L S    I   KDG EA +KL+ +  AA+ +N  V+  I  
Sbjct: 179 YHIMVIDDSAVARKQIIRALESLSLQIDTAKDGREALDKLVSV--AAEMDN--VAHEIPL 234

Query: 256 VVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIG 315
           +++D+EMP MDG  L   +RD+     + +V+ +SL    N+A    +GAND + K    
Sbjct: 235 IISDIEMPEMDGYTLTAEIRDNPKLKDIKVVLHTSLSGVFNQAMVEKVGANDFIAKFNPD 294

Query: 316 KMVAMMDKYI 325
           ++ A ++K++
Sbjct: 295 ELAAAVNKHL 304