Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  154 bits (390), Expect = 2e-42
 Identities = 102/310 (32%), Positives = 160/310 (51%), Gaps = 21/310 (6%)

Query: 16  GTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSRE 75
           G N LE++ F L     +GR +   +GINV KV+EV++ P  T  P   P++ GV   R 
Sbjct: 16  GQNRLELLLFKL-----NGRQR---FGINVFKVKEVLQCPPLTTLPKLNPYVKGVAHIRG 67

Query: 76  ILTPLVDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFL 135
               ++DL+   G          ++I++++NR   GFL+ S+ RI  ++W  +  P Q  
Sbjct: 68  TTISVIDLSAATGGRPLASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAIMPPPQ-- 125

Query: 136 EAGEQDCVVAVVRQDKKLIMILDFEKIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNA 195
            AG    + AV   + +L+ ILD EKI+ +I+P  +    +V     +D  Q        
Sbjct: 126 GAGRYSYLTAVTEIEGELVEILDVEKILDEISPVKTAISEEVNQQLTIDRTQHY------ 179

Query: 196 KTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDA 255
             IMV+DDSA  R  I  +L S    I   KDG EA +K   LK  A E N  V++ I  
Sbjct: 180 -HIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDK---LKAIASEMN-NVADEIPL 234

Query: 256 VVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIG 315
           +++D+EMP MDG  L   +RDD    ++ +V+ +SL    N+A    +GAND + K    
Sbjct: 235 IISDIEMPEMDGYTLTAEIRDDPKLKNIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPD 294

Query: 316 KMVAMMDKYI 325
           ++ A ++K++
Sbjct: 295 ELAAAVNKHL 304