Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (331), Expect = 1e-35
 Identities = 85/283 (30%), Positives = 148/283 (52%), Gaps = 19/283 (6%)

Query: 41  YGINVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPLVDLAGWLGVPTSTDISKK-- 98
           + +   K+RE++     +  P + P ++G  + R    P+VD+A  +G    +D  ++  
Sbjct: 22  FALGTLKIRELVPYTPLSKIPQSHPTILGAATIRGHTIPVVDMAAAIGYRPVSDEERQHC 81

Query: 99  YVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILD 158
           Y+I+TD  RM  GFL+ +I +I   +W D+E+PS  L  G+   +  V R D +L+ +LD
Sbjct: 82  YIIITDCQRMIIGFLVRAIDKIIECNWRDIEAPSANL--GKNAFLTGVTRYDNQLVQLLD 139

Query: 159 FEKIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSA 218
            E ++S + P+       +  D + +       K   + I++VDDS   R  + D L S 
Sbjct: 140 VELLLSKVFPDAPEANRAILTDVQRE-------KLKPRRILLVDDSKVARKQLSDALDSI 192

Query: 219 GYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDD 278
                   DG EA   L  ++QAA E +      ID +V+D+EMP +DG  L   +RD+ 
Sbjct: 193 NIPYFVTPDGREA---LSIMEQAAAEHHP-----IDILVSDIEMPGLDGYELAFEVRDNP 244

Query: 279 SYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIGKMVAMM 321
             ++  I++ +SL S+ + ++A  +GAN+ LTK +  ++V  M
Sbjct: 245 LLANAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELVEAM 287