Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 121 a.a., chemotaxis protein CheY (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 82.4 bits (202), Expect = 5e-21
 Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 14/132 (10%)

Query: 195 AKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELID 254
           +K I++VDDSA IR +++ TL SA Y +   KDG EA +                S+  D
Sbjct: 2   SKKILIVDDSAAIRQMVEATLKSANYQVTLAKDGREALDLCS-------------SQRFD 48

Query: 255 AVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKP-E 313
            ++TD  MPRMDG+ LIK LR   ++   PI+M ++   DD +A+  A+GA   + KP +
Sbjct: 49  FILTDQNMPRMDGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAVGATGWMVKPFD 108

Query: 314 IGKMVAMMDKYI 325
             K++A+  K +
Sbjct: 109 PQKLLAITAKVL 120