Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., chemotaxis protein CheV from Herbaspirillum seropedicae SmR1

 Score =  128 bits (322), Expect = 2e-34
 Identities = 89/311 (28%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 15  SGTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSR 74
           + +N+ E++ F L    P G  ++  +GINV K+RE++ +P  T     Q  M+G+ + R
Sbjct: 15  TASNKFELLLFRLGTD-PHGE-RSELFGINVFKIREIVPMPPVTKAAGTQSPMLGMVNIR 72

Query: 75  EILTPLVDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQF 134
             +  ++DL   +G    T ++   ++VT++ R T  F ++S+  I R+ W+ V S ++ 
Sbjct: 73  GQIISVIDLPAVVGCVPKTGLN--ILLVTEYARSTQAFAVESVDEIVRLEWSQVLS-AET 129

Query: 135 LEAGEQDCVVAVVRQDK---KLIMILDFEKIISDINP---ELSMEKYDVTVDRKVDLNQR 188
              G     +A +  DK   +L  +LD E+I+ +I P   +L ME  + +    +     
Sbjct: 130 SSGGAFVTSIARLDADKDTSRLAQVLDVEQILHEIMPTDRDLKMESLEKSASHGI----- 184

Query: 189 MVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVP 248
               R     +  DDS   RSLI+  L +          G EA EK+ +L + A+ E  P
Sbjct: 185 ----RPGTVAIAADDSKVARSLIEQGLRAMEIPYEMHVTGKEAWEKIQKLAREARAEGRP 240

Query: 249 VSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDT 308
           +S+ I  V+TD+EMP MDG  L + ++ +D   S+P+++ SSL    N     ++G +  
Sbjct: 241 ISDKISFVLTDLEMPEMDGFTLTRNIKREDYLKSIPVIIHSSLSGSANEDHVRSVGGDAY 300

Query: 309 LTKPEIGKMVA 319
           + K E  ++ A
Sbjct: 301 VAKFEANELAA 311