Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  143 bits (360), Expect = 6e-39
 Identities = 90/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)

Query: 16  GTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSRE 75
           G N LE++ F +          T  + INV KV+EV+++P     P + PH+ GV + R 
Sbjct: 16  GENRLELLLFRINS--------TQLFAINVFKVKEVVKLPPLNSMPGSHPHIFGVANIRG 67

Query: 76  ILTPLVDLAGWLG---VPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPS 132
           +  P++DL   +G   VP   D +   +I+T++NR   GFL+  +  I  ++W+D+  P 
Sbjct: 68  MSIPVIDLRSAIGFKPVPPGDDAN---MIITEYNRSVQGFLVGKVEHIINMTWSDIMPPP 124

Query: 133 QFLEAGEQDCVVAVVRQD----KKLIMILDFEKIISDINPELSMEKYDVTVDRKVDLNQR 188
           +   AG  + + A+ R +     +L+ I+D EK++++I        YD+ +   V L++ 
Sbjct: 125 K--TAGRNNYLTAITRIEYQGQSQLVSIIDVEKVLAEI------VHYDIRLSEGV-LDES 175

Query: 189 MVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVP 248
           ++ K   K +++VDDS+  R  +++TL   G  II   DG +A    + L Q  ++E   
Sbjct: 176 LLDKMPGKKVLIVDDSSTARRQVRETLGQLGIEIIEASDGLQA----LHLLQKWRDEGKN 231

Query: 249 VSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDT 308
           V++ +  ++TD EMP MDG  L   +R+D + S + I + +SL    N A    +G +  
Sbjct: 232 VAQELLMMITDAEMPEMDGYKLTYEVRNDKAMSDLFITLNTSLSGSFNNAMVEKVGCDRF 291

Query: 309 LTK 311
           ++K
Sbjct: 292 ISK 294