Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (328), Expect = 3e-35
 Identities = 86/288 (29%), Positives = 148/288 (51%), Gaps = 19/288 (6%)

Query: 36  TKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPLVDLAGWLGVPTSTDI 95
           ++T  + +   K+RE++     +  P + P ++G  + R    P+VD+A  +G    +D 
Sbjct: 17  SQTQVFALGTLKIRELVPYTPLSKIPQSHPTIMGAATIRGHTIPVVDMAAAIGYRPISDE 76

Query: 96  SKK--YVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKL 153
            ++  Y+I+TD  RM  GFL+ +I +I   +W D+E+PS  L  G    +  V R D +L
Sbjct: 77  ERQHCYIIITDCQRMIIGFLVRAIDKIIECNWRDIEAPSANL--GRNAFLTGVTRYDNQL 134

Query: 154 IMILDFEKIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQD 213
           + +LD E ++S + P+       +  D + +       K     I++VDDS   R  + D
Sbjct: 135 VQLLDVELLLSKVFPDAPEANRAILTDVQRE-------KLKPMRILLVDDSKVARKQLSD 187

Query: 214 TLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVVTDVEMPRMDGMHLIKR 273
            L S         DG EA   L  ++QAA E +      ID +V+D+EMP +DG  L   
Sbjct: 188 ALDSINIPYFVTPDGKEA---LSIMEQAAAEHHP-----IDILVSDIEMPGLDGYELAFE 239

Query: 274 LRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIGKMVAMM 321
           +RD+   +   I++ +SL S+ + ++A  +GAN+ LTK +  ++V  M
Sbjct: 240 VRDNPLLAKAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELVEAM 287