Pairwise Alignments

Query, 267 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., PBPb domain-containing protein from Pseudomonas aeruginosa PA14

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 10/267 (3%)

Query: 3   ISWLSILLWFSTSAFANHQTITLVLAAQNDNGHAYYHELLARALADQGISLVVETPYTHL 62
           + WL++L           + +     ++  N   Y  ELL  ALA  G    +E     +
Sbjct: 22  LRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALARSGGDYRLEPSAQPM 81

Query: 63  PQKRVVKMVENNQ--LSLTWLLETPERNKKFVHVDVPLTNGLIGQRILLIPPSLQSRLDK 120
           PQ R    +E +   L + W     +  +  + + +P+  GLIG RI L+  + +  L  
Sbjct: 82  PQSRAQLRLEQDDPGLQVMWAQSRDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDLLAS 141

Query: 121 VSNLNEFRQTRLVAGLGEGWLDIAVWRSNHLPFYIQNGEWRGLYKKLSVSGAVNYFPRGV 180
           V  L++ R+ R   G  + W D  + R+N L        +  L++ L  +G    FPR V
Sbjct: 142 VRTLDDLRRLRF--GQRQDWADTPILRANGLEVKTSQS-YESLFRMLD-AGRFEVFPREV 197

Query: 181 T----EIYQESILNPHLAIEQHLLFQYQRDFKFYLSPQAAQYQALLEQALKAAQESGLMR 236
                E+   S    HLAI+QHL   Y   F F++S Q  +    + Q L+ A   G   
Sbjct: 198 VVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFE 257

Query: 237 ELTEKYWGESLSLLRLDQRQVIELQVP 263
            L E+++   L  L L QR++IEL+ P
Sbjct: 258 RLFERHFKTRLEKLALRQRRIIELKNP 284