Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1099 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors from Synechococcus elongatus PCC 7942

 Score =  103 bits (256), Expect = 3e-26
 Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 9/160 (5%)

Query: 181  RDPLTGAHNRLSLTTSFQH----FERFSDQTSLCLLVIDLDFFKSINDQFGHDTGDKVLI 236
            RDPLTG  NR  L   F+      +R  D  S+ +L++D+D+FK  ND+FGHD GD VL 
Sbjct: 911  RDPLTGLFNRRYLQEFFEQELARAKRSGD--SIGILMLDIDYFKRFNDEFGHDAGDMVLK 968

Query: 237  ETTR-LFTQVVGDNNLYRIGGEEFCVTLFDQSLEQAGRVCEHLRAIVSQHLFAFREKRV- 294
            +  R L  QV   + + R GGEE  + +   SLE + R  + +R  ++Q + ++ E+ + 
Sbjct: 969  QVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAIAQLIISYHEQTLP 1028

Query: 295  QVTISIGVCEY-QAGDQLNDLLKFADMELYRAKKAGRNQV 333
             +TISIGV  + ++G   + L+K AD  LY+AK AGRN V
Sbjct: 1029 SLTISIGVAAFPESGLASDTLIKSADTSLYQAKAAGRNCV 1068