Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  101 bits (251), Expect = 3e-26
 Identities = 90/293 (30%), Positives = 136/293 (46%), Gaps = 37/293 (12%)

Query: 69  KQQVYLYLFILT---GTTLFATYMK-----PLMMGVYIWSCFVPILFYI---FTSARFAF 117
           KQ  +LY+  LT   G    A Y+K     P +  + +    VP+LF++   F+      
Sbjct: 5   KQSGHLYIQYLTLILGLLYAALYLKWTEHQPQLKHLELLLESVPVLFWLVIMFSCHYIRH 64

Query: 118 VTSCLFLIIQSNIIYWQLQ----------QTGAALSWSVL--LHLCFAYIGIWVVAHVYE 165
           +T    L++   II +              T  A    VL  + L  +  G+ ++ H   
Sbjct: 65  LTYSYVLLLSGAIISFFASLMDWLDEITVPTEFAFVEDVLQSIGLLLSATGLLLLFH--- 121

Query: 166 DNRRKIENSLLY-LASRDPLTGAHNRLSLTTSFQHFERFSDQTSLCLLVIDLDFFKSIND 224
              + ++ SLL  +A+ DPLTGA NR +      H        S    ++D+D FK IND
Sbjct: 122 --HQLVQQSLLKKIAATDPLTGALNRRAFKAPKTH------SGSTVFALVDVDHFKRIND 173

Query: 225 QFGHDTGDKVLIETTRLFT-QVVGDNNLYRIGGEEFCVTLFDQSLEQAGRVCEHLRAIVS 283
            +GHD GD VL+E  +L +  +  D+  +R GGEEF +      L QA +  E LR +V 
Sbjct: 174 TYGHDAGDFVLVELAKLISNHIREDDQFFRWGGEEFLLEFRQAELAQASKRMEALRQLVE 233

Query: 284 QHLFAFREKRVQVTISIGV-CEYQAGDQLNDLLKFADMELYRAKKAGRNQVRL 335
              F    + + +TIS G+ C       L   LK AD  LYRAK +GRN++ +
Sbjct: 234 SSHFNLNGQAINITISAGLTCVSPNHGGLEKALKAADEALYRAKDSGRNRIEV 286