Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  104 bits (260), Expect = 7e-27
 Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 7/179 (3%)

Query: 167 NRRKIENSLLYLASRDPLTGAHNRLS----LTTSFQHFERFSDQTSLCLLVIDLDFFKSI 222
           +R+ + + L +LA RDPLTG  NR S    L  +     RF     + ++ IDLD FK +
Sbjct: 364 DRKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFP-AAGVAVISIDLDRFKYV 422

Query: 223 NDQFGHDTGDKVLIETTR-LFTQVVGDNNLYRIGGEEFCVTLFDQSLEQAGRVCEHLRAI 281
           ND  GH  GD +L E    LF ++   + L R+GG+EF V L   + E A  V E LR  
Sbjct: 423 NDSLGHQAGDCLLKEVAEVLFGRLRETDLLARLGGDEFAVLLHGVNREGALHVAEALRLC 482

Query: 282 VSQHLFAFREKRVQVTISIGVCEYQAG-DQLNDLLKFADMELYRAKKAGRNQVRLFRHG 339
           ++ + F++  K V++  S+GV  + A  D   DLL  ADM +  AK+AGRN+V LF  G
Sbjct: 483 LADYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLAKRAGRNRVHLFEEG 541