Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  118 bits (295), Expect = 4e-31
 Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 6/195 (3%)

Query: 144 WSVLLHLCFAYIGIWVVAHVYEDNRRKIENSLLYLASRDPLTGAHNRLSLTTSF-QHFER 202
           W  L       IGI  ++++      + +  L  +AS D LTGA NR      F Q  ++
Sbjct: 292 WGNLALSLVVTIGILFISNM---TLGRYQRKLEIMASTDKLTGAANRQVFEEYFHQALDK 348

Query: 203 FS-DQTSLCLLVIDLDFFKSINDQFGHDTGDKVLIETTRLF-TQVVGDNNLYRIGGEEFC 260
               QTS+ +L+ID+D FK +ND +GH  GD VL   T L  +Q+   + L R GGEEF 
Sbjct: 349 AKLSQTSISILLIDIDHFKKVNDSYGHSVGDLVLKTVTNLLRSQLKPQDILCRWGGEEFL 408

Query: 261 VTLFDQSLEQAGRVCEHLRAIVSQHLFAFREKRVQVTISIGVCEYQAGDQLNDLLKFADM 320
           V L +  L +A  + E  R  +SQ         + +T+SIGV EYQ  +   DL+K AD+
Sbjct: 409 VLLPEMDLSRAAELAERFRDSISQRELKVNGVHIAITVSIGVAEYQKLEPAEDLIKRADL 468

Query: 321 ELYRAKKAGRNQVRL 335
            LY+AK+AGRNQV L
Sbjct: 469 ALYQAKEAGRNQVVL 483