Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (254), Expect = 1e-26
 Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 3/155 (1%)

Query: 182 DPLTGAHNRLSLTTSFQHFERFSDQT--SLCLLVIDLDFFKSINDQFGHDTGDKVL-IET 238
           D LTG  NR  +          SD+T  SLC+++ D+DFFK+IND FGH  GD VL I  
Sbjct: 155 DLLTGLANRRQIEDVLAAAMAKSDRTQSSLCVVMCDIDFFKNINDNFGHLCGDDVLKIVA 214

Query: 239 TRLFTQVVGDNNLYRIGGEEFCVTLFDQSLEQAGRVCEHLRAIVSQHLFAFREKRVQVTI 298
           ++L         + R GGEEF + L     E AG +CE LR +++   +    + +Q+T+
Sbjct: 215 SQLQHSAQAATCIARWGGEEFLIVLEHVVPESAGVLCEQLRGLIAATDYQSYGQHMQLTM 274

Query: 299 SIGVCEYQAGDQLNDLLKFADMELYRAKKAGRNQV 333
           S G  +YQA + L  LL   D  LY+AK  GRNQV
Sbjct: 275 SFGCVQYQANESLQSLLCRVDKALYQAKNGGRNQV 309