Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (255), Expect = 1e-26
 Identities = 70/174 (40%), Positives = 93/174 (53%), Gaps = 8/174 (4%)

Query: 168 RRKIENSLLYLASRDPLTGAHNRLSLTTSFQ-HFERFSDQTSLC-LLVIDLDFFKSINDQ 225
           + ++EN L   A  D LT  HNR +   + Q H  R  +Q + C LL+ID+D FK  ND 
Sbjct: 146 KTEMEN-LSLAAMTDQLTSLHNRRAYEIAIQDHIHRAEEQHTRCSLLLIDIDRFKVFNDT 204

Query: 226 FGHDTGDKVLIETTRLFTQVV-GDNNLYRIGGEEFCVTLFDQSLEQAGRVCEHLRAIVSQ 284
           +GH  GDKVL        Q V GD+ + R GGEEF V L +     A +V E LR  +S+
Sbjct: 205 YGHQVGDKVLAYVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRGRISE 264

Query: 285 HLFAF-REKRVQ---VTISIGVCEYQAGDQLNDLLKFADMELYRAKKAGRNQVR 334
              A  ++K++    +T+SIG+   Q GD    L   AD  LY AK  GRN VR
Sbjct: 265 RRLAIGKDKKLSLGAITVSIGLASLQKGDDAETLFSRADKALYEAKSDGRNCVR 318