Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N2E2

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 3/203 (1%)

Query: 59  VRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQGYQVEFQFLPWARAYAETQRGLYDATA 118
           +R+ +  WPPF  S L N G   +I++ A  + GY  +F+ +PWARA      G YD   
Sbjct: 25  LRLVADAWPPFTDSTLINGGLATDIVSTALARAGYATDFEQVPWARAMLGIGEGRYDVLV 84

Query: 119 IWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWKTLSDLAPYKLGGVLAYSYGKELDA 178
              +S ER     +S         F     +   + +L  L  Y +  V  Y+Y K+ D 
Sbjct: 85  NAWYSEERTHIGQFSAEYLLNRVRFIKRKDETIQFDSLQQLRAYPIAVVRGYAYSKDFDE 144

Query: 179 LLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYYLINQQIPHLQDLITHHPTPFL 238
            L    + +    +A +    LA  RV L  E++++  Y + ++   ++  +   P P  
Sbjct: 145 DLQMQKVPVHNFAMAVR---MLAADRVKLTLEDEYVARYYLARESAKVRSAVEFLPKPLS 201

Query: 239 TNSNYLLFPKQSARSQELLGVFN 261
            NS ++L   ++   ++++  F+
Sbjct: 202 ENSLHILVSLKNPEHEQIVAGFD 224