Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., periplasmic binding protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 7/193 (3%)

Query: 54  AEDKLVRIASGEWPPFIGSDLPNY-GFVGEIITQAFTKQGYQVEFQFLPWARAYAETQRG 112
           A  + +RI +  W P++  +     G   E     F + G  VE+QFLPW R     ++G
Sbjct: 3   ARAEKLRIVTEPWAPYVYEENGKMLGLDYETTAIVFKRLGIDVEWQFLPWKRCLVMLEQG 62

Query: 113 LYDATAIWMHSAEREIDFFY-SLPVSQEEFVFFYPVKKPFDWKTLSDLAPYKLGGVLAYS 171
           L D      HS ER+    Y S P+S  EFV FY   +P  ++TL DL    +G    Y 
Sbjct: 63  LADGALDIFHSDERDAMLLYPSEPLSDVEFVMFYANARPHPFRTLDDLRGLTVGTSPGYL 122

Query: 172 YGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYYLINQQIPHLQDLIT 231
           Y +   A  +S + T E       N  KL  GR+DL+  ++ +G +++      L D IT
Sbjct: 123 YSQ---AFSESTLFTRETAPTHEANFGKLQLGRIDLLITDRRVGRHVLEHM--QLGDQIT 177

Query: 232 HHPTPFLTNSNYL 244
            +P      S YL
Sbjct: 178 ENPMVVSRQSQYL 190