Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., putative solute-binding component of ABC transporter from Pseudomonas fluorescens FW300-N2E2

 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 14/241 (5%)

Query: 28  LKRYVRCC--LLIIGLCPALLYAQSSPNAEDKLVRIA-SGEWPPFIGSDLPNYGFVGEII 84
           +KR+   C   L+  L  A ++A  +   E   + IA SG+ P     D    G+ GEI+
Sbjct: 6   VKRFSGICAGFLVSVLAAAPVFALET--VEPGSLTIAFSGDMPGTGYQDSRMVGYDGEIL 63

Query: 85  TQAFTKQGYQVEFQFLPWARAYAETQRGLYDATAIWMHSAEREIDFFYSLPVSQEEFVFF 144
            Q   K G +V+   + W+   A  Q    D  A  M   E+      +L      F   
Sbjct: 64  QQISEKLGLKVKPALMEWSGTIASVQSKRVDVMAGTMGWTEQRSKIM-TLSDPIHYFKNG 122

Query: 145 YPVKKPFDWKTLSDLAPYKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGR 204
                  +W +L DL   K+G +  +S+  E+  +    V   +    A ++   L  GR
Sbjct: 123 ITQTDKTNWNSLKDLQGKKVGTITGFSFIPEMRKIDGLQVALYDTSDAAVRD---LLAGR 179

Query: 205 VDLVPEEKHIGYYLIN---QQIPHLQDLITHHPT-PFLTNSNYLLFPKQSARSQELLGVF 260
           +D V  +  +  Y I+   Q   H    + + P  P LT    ++F    A S EL+   
Sbjct: 180 IDAVIGDPPVMQYAISRNEQWHLHFNAFVDNDPNFPLLTGLGQVVFGFNKA-SPELVTAV 238

Query: 261 N 261
           N
Sbjct: 239 N 239