Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ABC transporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 2/208 (0%)

Query: 58  LVRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQGYQVEFQFLPWARAYAETQRGLYDAT 117
           +VR+ S  WPP+ G  LP+ G    +   AF   GYQ+E  F PW+RA     +      
Sbjct: 38  VVRLTSLNWPPYSGQGLPSEGAAVAVAKAAFAAMGYQLEVDFYPWSRAVKLAHQSNTPYV 97

Query: 118 AIWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWKTLSDLAPYKLGGVLAYSYGKELD 177
             +       + F +S P+            +P  W ++ DL  Y+LG V  Y   +ELD
Sbjct: 98  GYFPEYYFDTVQFVFSHPMGMSPLGLLEHKSRPISWVSVKDLRNYRLGVVQDYVNTEELD 157

Query: 178 ALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYYLINQ-QIPHLQDLITHHPTP 236
             +   +   E+      N++K+A GR+D    + ++  YL+ Q ++  + D +  + + 
Sbjct: 158 RAIADDLQPAEQVTSDEFNIKKVAAGRIDAAVIDVYVMRYLLKQSRLQGVADKVQIN-SQ 216

Query: 237 FLTNSNYLLFPKQSARSQELLGVFNHYL 264
            L N N  +  K +        +FN  L
Sbjct: 217 LLANKNLYIAFKNTPEGHRWQAIFNEGL 244