Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 85.9 bits (211), Expect = 8e-22
 Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 9/237 (3%)

Query: 33  RCCLLIIGLCPALLYAQSSPNAEDKLVRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQG 92
           R  LLI  L P    AQ     E K + + + + PPF    L ++G V  ++ +A  ++G
Sbjct: 5   RLTLLICLLLPLWGIAQ-----EPKTLTLVATDLPPFYAESLDHFGPVAVLVLEALQRRG 59

Query: 93  YQVEFQFLPWARAYAETQRGLYDATAIWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFD 152
           YQVE +F P+ RA A  + G  DA     + AERE   +YS P+   E VF    +    
Sbjct: 60  YQVELKFYPFIRATALIKAGKADAIIGLWYRAERESWAYYSRPLQGTEIVFMARKQDHIG 119

Query: 153 WKTLSDLAPYKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEK 212
           +  LS+L   ++G     S G    A + S  L  E       NL KL  GRVDL+   +
Sbjct: 120 YHQLSELQDKRIG----ISRGYANPAAIASNKLHTEEADSDETNLRKLLLGRVDLIVISR 175

Query: 213 HIGYYLINQQIPHLQDLITHHPTPFLTNSNYLLFPKQSARSQELLGVFNHYLVQTQK 269
           ++  +LI       Q        P      +L   K    + +LL  FN  +V  ++
Sbjct: 176 NVAQHLIAHSPAEYQGQFEFVGEPLAKEVFHLGVSKTREGNVQLLEDFNQAIVSMEE 232