Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., amino acid ABC transporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 43.5 bits (101), Expect = 5e-09
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 33  RCCLLIIGLCPALLYAQSSPNAEDKLVRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQG 92
           R CL  +     LL++    + E  +   A   WPPF  +D    G    +I +AF  +G
Sbjct: 3   RPCLRSVMSIVFLLFSTMVSSNETSIRLAAEDSWPPF--ADAAGEGLSHRLIAKAFALEG 60

Query: 93  YQVEFQFLPWARAYAETQRGLYDAT-AIWMHSAEREIDFFYSLPVSQEEFVFFY-----P 146
             V+   +P+ R    T++G  +A   + M    RE  +F   P+      F+      P
Sbjct: 61  IYVDTLVVPYNRGLILTEQGKVNAVFNVAMQQNTRERFWFGEEPLFVATASFYQLSRNAP 120

Query: 147 VKKPFDWKTLSDLAPYKLGGVLAYSYGKELDAL 179
           + K   W    D    ++G V  Y YG E D L
Sbjct: 121 LAKD-KWSLPKDT---RVGIVRGYEYGDEFDRL 149