Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 21/260 (8%)

Query: 26  GYLKRYVRCCLLIIGLC--PALLYAQSSPN--------------AEDKLVRIASGEWPPF 69
           G+LK+  R   L++GL     LL AQ+  +              A+  L+ + S ++PPF
Sbjct: 5   GWLKQIWRVMSLVVGLALWQMLLCAQAMASDGERHSELHQLPAMAKTPLISV-SNDYPPF 63

Query: 70  IGSDLPNYGFVGEIITQAFTKQGYQVEFQFLPWARAYAETQRGLYDATAIWMHSAEREID 129
               +  +G V  ++   F   GY +  +F P+ RA    +R L D      +  ERE  
Sbjct: 64  YSPQMSEWGVVYHLVEAVFEHAGYPLSHEFYPFIRAQTLIKRELADLIIGVWYRPEREQW 123

Query: 130 FFYSLPVSQEEFVFFYPVKKPFDWKTLSDLAPYKLGGVLAYSYGKELDALLDSGVLTMER 189
             +S P+       +        ++ + DL PY +G       G           L  E 
Sbjct: 124 IDFSDPLLSVSIRLYKRSDSKIVFRDIKDLKPYLIG----IGRGYANPVAFGQANLNTEA 179

Query: 190 DGLAAKNLEKLAKGRVDLVPEEKHIGYYLINQQIPHLQDLITHHPTPFLTNSNYLLFPKQ 249
               A NL KL  GRVDLV   + +  YLI +        +     P      ++   K 
Sbjct: 180 ASSDAVNLRKLLAGRVDLVLICEDVARYLIERPGSEYNGKLEPVGDPLSVELFHIGVAKH 239

Query: 250 SARSQELLGVFNHYLVQTQK 269
              ++++L  FN  L +  +
Sbjct: 240 LPNARQILADFNQSLAELHR 259