Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 69/234 (29%), Positives = 101/234 (43%), Gaps = 5/234 (2%)

Query: 36  LLIIGLCPALLYAQSSPNAEDKLVRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQGYQV 95
           L+ IGL   LL   SSP+   + + + +  +PPF    LP  G V +++ +AF  QGY  
Sbjct: 6   LINIGLTLILL-GLSSPSFAGRELNLVATNYPPFYADALPEQGGVAQVVKEAFKLQGYNA 64

Query: 96  EFQFLPWARAYAETQRGLYDATAIWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWKT 155
              F P+ARA    + G  D      +  ERE    YS P+   + VF+     P  +  
Sbjct: 65  SVTFYPFARAALLVKTGQADGIIGLWYRKEREQWAHYSAPIQAVQIVFYKRKDNPLSFSQ 124

Query: 156 LSDLAPYKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIG 215
           LS+L P+ +G    Y+   E+ A      LT E       NL+KL   R+DLV    ++ 
Sbjct: 125 LSELKPFTIGIGRGYANPPEIAAT----GLTTEEGNSDEINLKKLFLKRIDLVLIGHNLA 180

Query: 216 YYLINQQIPHLQDLITHHPTPFLTNSNYLLFPKQSARSQELLGVFNHYLVQTQK 269
            YLI + +    DL      P  T   +L           L+  FN  L   +K
Sbjct: 181 QYLIKKNLSEYADLFEQVGDPIATEVFHLGVSLAITDQATLIAEFNKGLESMRK 234