Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 46  LYAQSSPNAEDKLVRIASGEWPPFIGSDLPN---YGFVGEIITQAFTKQGYQVEFQFLPW 102
           L   +SP A + LV  A  +W P+   D  +    G   E++   F  +  ++ F+ LP+
Sbjct: 13  LLGAASPLAAEPLVIGAEDDWAPYCALDKQSGQPLGLAPELVKAVFATEKLEIAFRPLPF 72

Query: 103 ARAYAETQRG----LYDATAIWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWKTLSD 158
           AR   + + G     ++AT   +    R   +++  P+ +E+   F    +P     LS 
Sbjct: 73  ARCMHDAKSGKVVGCFNAT---ITEENRNQYYWHKTPMFEEDLAIFALASEPNRDLQLSS 129

Query: 159 LAPYKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYYL 218
           L   ++G  L Y+Y  +    +D+  +T       A+ LE L +GRVD +      GY  
Sbjct: 130 LEGKRVGITLGYTYPTDF---MDNTKITRFEAKSDAQILEMLVRGRVDYILMNGMPGYLQ 186

Query: 219 INQQ 222
           I Q+
Sbjct: 187 IQQR 190